SVMicrO is mammalian miRNA target prediction algorithm, which assumes a 2-stage structure including a site support vector machine (SVM) followed by a UTR-SVM. SMVicrO makes prediction based on 21 optimal site features and 18 optimal UTR features, selected by training from a comprehensive collection of 113 site and 30 UTR features. Comprehensive evaluation of SVMicrO performance has been carried out on the training data, proteomics data, and immunoprecipitation (IP) pull-down data.
Last Software Update: Sept. 22, 2010
Publication Date: Sept. 22, 2010
Citations: 32 [via Pubmed]
Reference Genome Needed:
Installation/User Level: advanced
Precomputed Target Results Available For Download: (human)
Performance : Sensitivity: 96%