RNAhybrid is a tool for finding the minimum free energy hybridization of a long and a short RNA. The hybridization is performed in a kind of domain mode, ie. the short sequence is hybridized to the best fitting part of the long one. The tool is primarily meant as a means for microRNA target prediction.
Last Software Update: Aug. 25, 2013
Publication Date: July 1, 2006
Citations: 575 [via Pubmed]
Reference Genome Needed:
Installation/User Level: easy
Precomputed Target Results Available For Download:
Performance : Sensitivity: 58%