All the tools you need to analyse your miRNAs


Target Prediction

MR-microT is a MapReduce-based implementation of microT target prediction method. It provides near-real time predictions for custom miRNA sequences.

Homepage: Link

Last Software Update: May 19, 2016
Publication Date: June 30, 2014
Reference: [Journal] [CrossRef]

Organism Specific:
  • mouse
  • human

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: easy
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    Input Data Required:
  • miRNA sequence

  • Target Prediction
    Algorithm Features:
  • seed match
  • conservation
  • free energy
  • site accessibility
  • G:U pairs allowed in the seed

  • Target Region: 3'UTR,CDS
    Target Annotation:
    Algorithm: microT
    NGS Data Needed:

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