A rigorous biophysical model of miRNA-target interaction and infer its energy parameters from Ago-CLIP data. The model includes parameters associated with base pairs and loops and specific miRNA position–dependent energy parameters that reflect the constraints imposed by the Argonaute protein on miRNA-mRNA interaction.
Last Software Update: Jan. 30, 2015
Publication Date: Jan. 20, 2013
Reference: [Journal] [Pubmed] [CrossRef]
Citations: 74 [via Pubmed]
Reference Genome Needed:
Installation/User Level: intermediate (local)
Precomputed Target Results Available For Download: