All the tools you need to analyse your miRNAs

MIRZA-G


Target Prediction


A suite of algorithms for the prediction of miRNA targets and siRNA off-targets on a genome-wide scale. The MIRZA-G variant that uses evolutionary conservation performs better than currently available methods in predicting canonical miRNA target sites and in addition, it predicts non-canonical miRNA target sites with similarly high accuracy. Furthermore, MIRZA-G variants predict siRNA off-target sites with an accuracy unmatched by currently available programs.

Homepage: Link

Last Software Update: Sept. 22, 2014
Publication Date: Jan. 27, 2015
Citations: 15 [via Pubmed]

Organism Specific:
  • human

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: advanced
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    Target Prediction
    Algorithm Features:
  • seed match
  • conservation
  • free energy
  • site accessibility
  • 3' compensatory pairing
  • G:U pairs allowed in the seed

  • Target Region: 3' UTR
    Target Annotation:
    NGS Data Needed:
    Metaserver:





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