GUUGle efficiently locates potential helical regions under RNA base pairing rules, which include Watson-Crick as well as G-U pairs. It accepts a target and a query set of sequences, and determines all exact matches under RNA rules between target and query sequences that exceed a specified length.
Last Software Update: June 25, 2015
Publication Date: Jan. 10, 2006
Citations: 18 [via Pubmed]
Reference Genome Needed:
Installation/User Level: easy
Precomputed Target Results Available For Download: