All the tools you need to analyse your miRNAs

comTAR


Target Prediction


Analysis Scheme:
comTAR allows users to analyze the variations of known miRNA targets during evolution and to predict previously unknown interactions by focusing on the conservation of the potential targeting.

Homepage: Link

Last Software Update: March 14, 2014
Publication Date: March 14, 2014
Citations: 3 [via Pubmed]

Organism Specific:
  • plants

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: easy
    User Adjustability: (very small)
    User support:
    Precomputed Target Results Available For Download:
    Target Prediction
    Algorithm Features:
  • seed match
  • conservation
  • free energy
  • G:U pairs allowed in the seed

  • Target Region: any
    Target Annotation:
    NGS Data Needed:
    Metaserver:





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