ComiR (Combinatorial miRNA targeting) predicts whether a given mRNA is targeted by a set of miRNAs. ComiR uses miRNA expression to improve and combine multiple miRNA targets for each of the four prediction algorithms: miRanda, PITA, TargetScan and mirSVR. The composite scores of the four algorithms are then combined using a support vector machine trained on Drosophila Ago1 IP data.
Last Software Update: July 21, 2014
Publication Date: Dec. 20, 2012
Citations: 19 [via Pubmed]
Reference Genome Needed:
Installation/User Level: easy
User Adjustability: (very small)
Precomputed Target Results Available For Download: