All the tools you need to analyse your miRNAs

miRSystem


miRNA Databases Target Functional Analysis


Analysis Scheme:
A database which integrates seven well known miRNA target gene prediction programs: DIANA, miRanda, miRBridge, PicTar, PITA, rna22, and TargetScan. This database contains validated data from TarBase and miRecords on interaction between miRNA and its target genes.

Homepage: Link

Last Software Update: May 13, 2016
Publication Date: Aug. 1, 2012
Citations: 90 [via Pubmed]

Organism Specific:
  • human
  • mouse

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: easy
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    Cross-Refferences:
  • TarBase
  • miRecords
  • miRBase
  • REACTOME
  • Pathway Interaction Database

  • miRNA Databases
    Software Used For Target Prediction:
  • DIANA
  • miRanda
  • miRBridge
  • PicTar
  • PITA
  • rna22
  • TargetScan

  • Data Collection:
  • miRNA basic information
  • target experimental
  • predicted target
  • diseases/pathways

  • Target Functional Analysis
    Analysis Features:
  • GO Terms
  • KEGG Pathways
  • Protein-Protein Interaction
  • NGS Data Needed:
    Target Prediction Data Needed:





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