All the tools you need to analyse your miRNAs

miRGator


miRNA Databases Target Functional Analysis


Analysis Scheme:
Aims to be the microRNA (miRNA) portal encompassing microRNA diversity, expression profiles, target relationships, and various supporting tools. By keeping datasets and analytic tools up-to-date, miRGator should continue to serve as an integrated resource for biogenesis and functional investigation of miRNAs.

Homepage: Link

Last Software Update: Nov. 27, 2012
Publication Date: Nov. 27, 2012
Citations: 44 [via Pubmed]

Organism Specific:
  • human

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: intermediate
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    Cross-Refferences:
  • miRBase
  • GEO
  • NCBI
  • PubMed
  • Ensembl

  • miRNA Databases
    Software Used For Target Prediction:
  • miRNA.org
  • TargetScan
  • microCosm
  • PITA
  • miRDB
  • PicTar

  • Data Collection:
  • miRNA basic information
  • target experimental
  • predicted target
  • diseases/pathways
  • target expression
  • miRNA expression

  • Target Functional Analysis
    Analysis Features:
  • GO Terms
  • KEGG Pathways
  • NGS Data Needed:
    Target Prediction Data Needed:





    Comments & Ratings