Sequencing Analysis Differential Expression Analysis Known miRNA Identification
A computational framework that automates multi-omics data analysis pipelines on high performance compute clusters and in the cloud. It supports best practice published pipelines for RNA-seq, miRNA-seq, Exome-seq, Whole Genome sequencing, ChIP-seq analyses and automatic processing of data from The Cancer Genome Atlas (TCGA). Omics Pipe provides researchers with a tool for reproducible, open source and extensible next generation sequencing analysis.
Last Software Update: Nov. 17, 2015
Publication Date: Jan. 30, 2015
Citations: 27 [via Pubmed]
Reference Genome Needed:
Installation/User Level: advanced
Precomputed Target Results Available For Download: