All the tools you need to analyse your miRNAs

miRExpress


Sequencing Analysis Known miRNA Identification


Analysis Scheme:
A stand-alone software package implemented for generating miRNA expression profiles from high-throughput sequencing of RNA without the need for sequenced genomes.

Homepage: Link

Last Software Update: Sept. 13, 2012
Publication Date: Oct. 12, 2009
Citations: 87 [via Pubmed]

Organism Specific:
  • any (from miRBase)

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: intermediate
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    License: GPLv3
    Sequencing Analysis
    Algorithm Features:
  • known miRNA identification

  • Sequencing Platform Specific: Illumina, 454, SOLiD
    PARE/CLIP-Seq: /
    Known miRNA Identification
    NGS Data Needed:





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