All the tools you need to analyse your miRNAs

PlantMiRNAPred


Novel miRNA/Precursor Prediction


Analysis Scheme:
A classification method based on support vector machine (SVM) is proposed specifically for predicting plant pre-miRNAs. The ability of PlantMiRNAPred to discern real and pseudo pre-miRNAs provides a viable method for discovering new non-homologous plant pre-miRNAs.

Homepage: Link

Last Software Update: March 26, 2011
Publication Date: March 26, 2011
Citations: 19 [via Pubmed]

Organism Specific:
  • plants

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: easy
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    Performance : Accuracy: > 90%
    Novel miRNA/Precursor Prediction
    Prediction Features:
  • sequence
  • structure

  • Algorithm: ab initio, SVM
    Novel miRNA / Precursor Analysis: Classification
    NGS Data Needed:





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