All the tools you need to analyse your miRNAs

NOVOMIR


Novel miRNA/Precursor Prediction


NOVOMIR, a program for the identification of miRNA genes in plant genomes. It uses a series of filter steps and a statistical model to discriminate a pre-miRNA from other RNAs and does rely neither on prior knowledge of a miRNA target nor on comparative genomics.

Homepage: Link Offline

Last Software Update: Feb. 5, 2014
Publication Date: Sept. 13, 2010
Citations: 5 [via Pubmed]

Organism Specific:
  • plants

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: advanced
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    Performance : Sensitivity: 83%, Specificity: 99%
    License: GPLv3
    Novel miRNA/Precursor Prediction
    Prediction Features:
  • sequence
  • structure
  • miRNA/miRNA* position prediction

  • Algorithm: Heuristic filters and paired HMM
    Novel miRNA / Precursor Analysis: Classification
    NGS Data Needed:





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