All the tools you need to analyse your miRNAs

miRNA Digger

Novel miRNA/Precursor Prediction Sequencing Analysis

Analysis Scheme:
miRNA Digger was developed for systematical discovery of miRNA candidates through genome-wide screening of cleavage signals based on degradome sequencing data.

Homepage: Link

Last Software Update: Jan. 6, 2016
Publication Date: Jan. 6, 2016
Citations: 7 [via Pubmed]

Organism Specific:
  • any (from miRBase)

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: easy
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    Sequencing Analysis
    Algorithm Features:
  • novel miRNA Identification

  • Sequencing Platform Specific: Illumina
    PARE/CLIP-Seq: /
    Novel miRNA/Precursor Prediction
    Prediction Features:
  • sequence
  • structure
  • Dicer-mediated cleavage sites mapping

  • Novel miRNA / Precursor Analysis: Prediction
    NGS Data Needed:

    Comments & Ratings