All the tools you need to analyse your miRNAs

microPred


Novel miRNA/Precursor Prediction


Analysis Scheme:
microPred classifier system should classify real human pre-miRNA hairpins from both pseudo hairpins and other ncRNAs. The microPred classifier could be used to predict novel human pre-miRNAs in both comparative and non-comparative ways.

Homepage: Link

Last Software Update: Feb. 20, 2009
Publication Date: Feb. 20, 2009
Citations: 61 [via Pubmed]

Organism Specific:
  • animals
  • viruses

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: easy
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    Performance : Sensitivity: 90.02%, Specificity: 97.28%
    Novel miRNA/Precursor Prediction
    Prediction Features:
  • sequence
  • structure
  • conservation

  • Algorithm: SVM
    Novel miRNA / Precursor Analysis: Classification
    NGS Data Needed:





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