All the tools you need to analyse your miRNAs

miRseqViewer


Other Tools


Analysis Scheme:
miRseqViewer is a highly interactive application that visualizes the sequence alignment, secondary structure and normalized read counts in synchronous multi-panel windows. This helps users to easily examine the relationships between the structure of precursor and the sequences and abundance of final products and thereby will facilitate the studies on miRNA biogenesis and regulation.

Homepage: Link

Last Software Update: Sept. 22, 2014
Publication Date: Oct. 15, 2014
Citations: 1 [via Pubmed]

Organism Specific:
  • any (supports 84 organism from miRBase)

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: easy
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    License: LGPL-2.1
    Input Data Required:
  • miR-seq data
  • alignment in BAM format

  • Cross-Refferences:
  • miRBase






  • Comments & Ratings