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miRLocator


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Analysis Scheme:
miRLocator is a ML-based system for the computational prediction of mature miRNAs within plant pre-miRNAs. miRLocator was constructed based on 440 sequence and structural features extracted from miRNA duplexes.

Homepage: Link

Last Software Update: Aug. 31, 2015
Publication Date: Nov. 11, 2015
Citations: 2 [via Pubmed]

Organism Specific:
  • plants

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: intermadiate
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    Algorithm: Random Forest, cross-validation
    Performance : Accuracy: 61%-73%
    License: GPLv2
    Input Data Required:
  • training data set - premiRNA and miRNA sequences
  • test set - premiRNA sequences






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