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A pipeline to identify miRNA binding sites from Ago2-CLIP data by de novo motif finding.

Homepage: Link

Last Software Update: Nov. 17, 2016
Publication Date: Jan. 20, 2017
Citations: 17 [via Pubmed]

Organism Specific:
  • human
  • mouse

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: intermediate
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    Input Data Required:
  • coordinates of peaks found by peak calling tool
  • a file with the most expressed miRNA in fasta format

  • Comments & Ratings