All the tools you need to analyse your miRNAs

YM500v2


miRNA Databases


YM500 is an integrated database for miRNA quantification, isomiR identification, arm switching discovery and novel miRNA prediction from small RNA sequencing (smRNA-seq). In this update of YM500, we focus on the cancer miRNAome to make the database more disease-orientated.

Homepage: Link

Last Software Update: Nov. 14, 2014
Publication Date: Nov. 14, 2014
Citations: 20 [via Pubmed]

Organism Specific:
  • human

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: easy
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    Cross-Refferences:
  • miRBase
  • Ensembl
  • NCBI

  • miRNA Databases
    Software Used For Target Prediction:
  • miRanda
  • TargetScan

  • Data Collection:
  • miRNA basic information
  • predicted target
  • diseases/pathways
  • miRNA expression






  • Comments & Ratings