All the tools you need to analyse your miRNAs


miRNA Databases

A CouchDB database of miRNA-gene interactions. TargetHub provides a programmer-friendly interface to access miRNA targets. The Web site provides RESTful access to miRNA-gene interactions with an assortment of gene and miRNA identifiers. It can be a useful tool to integrate miRNA target interaction data directly into high-throughput bioinformatics analyses.

Homepage: Link

Last Software Update: Sept. 6, 2013
Publication Date: Sept. 6, 2013
Citations: 10 [via Pubmed]

Organism Specific:
  • human

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: easy
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
  • miRBase
  • Ensembl
  • HUGO
  • NCBI
  • geneSmash
  • UCSC
  • GeneCard

  • miRNA Databases
    Software Used For Target Prediction:
  • TargetScan
  • PicTar
  • miRanda
  • mirTarBase

  • Data Collection:
  • miRNA basic information
  • target experimental
  • predicted target

  • Comments & Ratings