All the tools you need to analyse your miRNAs


miRNA Databases

Analysis Scheme:
A miRNA-target interaction R package and database, which includes: (i) compilation of nearly 50 million records in human and mouse from 14 different databases, more than any other collection; (ii) expansion of databases to those based on disease annotation and drug microRNA response, in addition to many experimental and computational databases; and (iii) user-defined cutoffs for predicted binding strength to provide the most confident selection.

Homepage: Link

Last Software Update: Aug. 8, 2014
Publication Date: July 24, 2014
Citations: 192 [via Pubmed]

Organism Specific:
  • human
  • mouse

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: intermediate
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    miRNA Databases
    Software Used For Target Prediction:
  • DIANA-microT-CDS
  • ElMMo
  • MicroCosm
  • miRanda
  • miRDB
  • PicTar
  • PITA
  • TargetScan

  • Data Collection:
  • target experimental
  • predicted target
  • diseases/pathways

  • Comments & Ratings