All the tools you need to analyse your miRNAs

DIANA-miRGen v3.0


miRNA Databases


Aim of DIANA-miRGen v3.0 is to provide for the first time accurate cell-line-specific miRNA gene transcription start sites (TSSs), coupled with genome-wide maps of transcription factor (TF) binding sites in order to unveil the mechanisms of miRNA transcription regulation. The database currently supports 276 miRNA TSSs that correspond to 428 precursors and >19M binding sites of 202 TFs on a genome-wide scale in nine cell-lines and six tissues of Homo sapiens and Mus musculus.

Homepage: Link

Last Software Update: Nov. 19, 2015
Publication Date: Nov. 19, 2015
Citations: 15 [via Pubmed]

Organism Specific:
  • human
  • mouse

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: easy
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    Cross-Refferences:
  • MicroT-CDS
  • miRBase
  • DIANA-miRPath v3
  • Ensembl
  • UCSC
  • LncBase Predicted
  • LncBase Experimental
  • DIANA-TarBase

  • miRNA Databases
    Data Collection:
  • diseases/pathways
  • target expression
  • transcription factor-miRNA regulation






  • Comments & Ratings