All the tools you need to analyse your miRNAs

miRNA Databases

A comprehensive resource of microRNA target predictions and expression profiles. Target predictions are based on a development of the miRanda algorithm which incorporates current biological knowledge on target rules and on the use of an up-to-date compendium of mammalian microRNAs. MicroRNA expression profiles are derived from a comprehensive sequencing project of a large set of mammalian tissues and cell lines of normal and disease origin.

Homepage: Link

Last Software Update: Nov. 1, 2010
Publication Date: Dec. 23, 2007
Citations: 1293 [via Pubmed]

Organism Specific:
  • human
  • mouse
  • rat
  • worm
  • fly

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: easy
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
  • miRo
  • miRBase

  • miRNA Databases
    Software Used For Target Prediction:
  • miRanda - mirSVR

  • Data Collection:
  • miRNA basic information
  • predicted target
  • miRNA expression

  • Comments & Ratings
    • Eman Toraih Wed 21 Nov 2018 14:45
      It was an excellent database but unavailable now. If this could be fixed!