All the tools you need to analyse your miRNAs

HOCTARdb


miRNA Databases


Analysis Scheme:
The HOCTAR database (db) is a publicly available resource collecting ranked list of predicted target genes for 290 intragenic miRNAs annotated in human. HOCTARdb is a unique resource that integrates miRNA target prediction genes and transcriptomic data to score putative miRNA targets looking at the expression behavior of their host genes.

Homepage: Link

Last Software Update: Jan. 1, 2010
Publication Date: March 22, 2011
Citations: 21 [via Pubmed]

Organism Specific:
  • human

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: easy
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    Cross-Refferences:
  • HGNC
  • miRBase

  • miRNA Databases
    Software Used For Target Prediction:
  • PicTar
  • TargetScan
  • miRanda

  • Data Collection:
  • predicted target
  • diseases/pathways






  • Comments & Ratings