All the tools you need to analyse your miRNAs

isomiReX


Sequencing Analysis Differential Expression Analysis Known miRNA Identification IsomiRs Identification


Analysis Scheme:
IsomiRex is a open-access web platform to identify isomiRs and on the fly graphical visualization of the differentially expressed miRNAs in control as well as treated library.

Homepage: Link Offline

Last Software Update: Aug. 19, 2013
Publication Date: July 4, 2013
Citations: 17 [via Pubmed]

Organism Specific:
  • any

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: easy
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    Sequencing Analysis
    Algorithm Features:
  • known miRNA identification
  • differential expression
  • isomiRs identyfication

  • Sequencing Platform Specific: Illumina
    PARE/CLIP-Seq: /
    Differential Expression Analysis
    Algorithm: DESeq
    miRNA differential expression:
    mRNA differential expression:
    NGS Data Needed:
    Known miRNA Identification
    NGS Data Needed:
    IsomiRs Identification
    NGS Data Needed:





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