Sequencing Analysis Differential Expression Analysis Known miRNA Identification
Chimira is a web-based system for miRNA analysis from small RNA-Seq data. Sequences are automatically cleaned, trimmed, size selected and mapped directly to miRNA hairpin sequences. This generates count-based miRNA expression data for subsequent statistical analysis. Moreover, it is capable of identifying epi-transcriptomic modifications in the input sequences. Supported modification types include multiple types of 3′-modifications, 5′-modifications and also internal modifications or variation.
Last Software Update: Jan. 22, 2016
Publication Date: June 20, 2015
Citations: 30 [via Pubmed]
Reference Genome Needed:
Precomputed Target Results Available For Download: