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novoMiRank


Novel miRNA/Precursor Prediction


novoMiRank is a tool for ranking novel miRNAs that have been predicted from next-generation sequencing (NGS) data. Since in later miRBase versions the increase of miRNAs derived from NGS data and prediction tools is noticeable, we provide with our tool a way to compare user-defined novel miRNAs to e.g. early miRBase versions and rank the user input miRNAs according to their distance from the distribution of the selected reference miRBase versions.

Homepage: Link

Last Software Update: Dec. 1, 2015
Publication Date: Dec. 3, 2015
Reference: [Journal] [Pubmed] [CrossRef]
Citations: 37 [via Pubmed]

Organism Specific:
  • human

    • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: easy
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    Novel miRNA/Precursor Prediction
    Prediction Features:
  • sequence
  • structure
  • Norther Blot validated miRNAs

    • Algorithm: PCA, complete linkage hierarchical clustering, z-score calculations
    Novel miRNA / Precursor Analysis: Classification
    NGS Data Needed:





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