MIREAP

MIREAP combines small RNA position and depth with a model of microRNA biogenesis to discover microRNAs from deeply sequenced small RNA library.

Homepage: Link

Last Software Update: March 27, 2013

Reference: [Journal]

Organism Specific:

any

Reference Genome Needed:

Online/Local: /

Installation/User Level: intermediate

User Adjustability:

User support:

Precomputed Target Results Available For Download:

License: GPL

Algorithm Features:

novel miRNA Identification

known miRNA identification

precursor prediction

Sequencing Platform Specific: Illumina, 454, SOLiD

PARE/CLIP-Seq: /

Prediction Features:

sequence

structure

conservation

Novel miRNA / Precursor Analysis: Prediction

NGS Data Needed:

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