deepSOM
Novel miRNA/Precursor Prediction
Novel machine learning tool for novel miRNA precursor prediction in genome-wide data. Approach is based on clustering unlabeled sequences of a genome together with well-known miRNA precursors for the organism under study, which allows for the quick identification of the best candidates to miRNA as those sequences clustered together with known precursors. A deepSOM model is used to overcome the problem of having very few positive class labels.
Homepage: Link
Last Software Update: June 6, 2016
Publication Date: June 7, 2016
Citations: 9 [via Pubmed]
Organism Specific:
Reference Genome Needed:
Online/Local:
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Installation/User Level: advanced
User Adjustability:
User support:
Precomputed Target Results Available For Download:
Performance : Specificity: 81,55%
License: GPL