PIPmir
Novel miRNA/Precursor Prediction Sequencing Analysis Known miRNA Identification
Analysis Scheme:
PIPmiR is a algorithm to identify novel plant miRNA genes from a combination of deep sequencing data and genomic features. The algorithm can be used as the full pipeline, as just a classifier, or as just a plant precursor sequence predictor.
Homepage: Link
Last Software Update: Nov. 30, 2012
Publication Date: Sept. 22, 2011
Citations: 65 [via Pubmed]
Organism Specific:
Reference Genome Needed:
Online/Local:
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Installation/User Level: advanced
User Adjustability:
User support:
Precomputed Target Results Available For Download:
Performance : Sensitivity: 91.7%, Specificity: 99.9%
License: free for academic use