Target Prediction Sequencing Analysis
From miRTarCLIP scratch, it automatically removes adaptor sequences from raw reads, filters low quality reads, reverts C to T, aligns reads to 3'UTRs, scans for read clusters, identifies high confidence miRNA target sites, and provides annotations from external databases. With multi-threading techniques and our novel C to T reversion procedure, miRTarCLIP greatly reduces the running time comparing to conventional approaches.
Last Software Update: Nov. 30, 2013
Publication Date: Jan. 21, 2013
Citations: 23 [via Pubmed]
Reference Genome Needed:
Installation/User Level: advanced
Precomputed Target Results Available For Download: