HHMMiR
Novel miRNA/Precursor Prediction
Analysis Scheme:
An approach for de novo miRNA hairpin prediction in the absence of evolutionary conservation. This implements a Hierarchical Hidden Markov Model (HHMM) that utilizes region-based structural as well as sequence information of miRNA precursors.
Homepage: Link
Last Software Update: Aug. 19, 2009
Publication Date: Jan. 30, 2009
Citations: 34 [via Pubmed]
Organism Specific:
Reference Genome Needed:
Online/Local:
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Installation/User Level: advanced
User Adjustability:
User support:
Precomputed Target Results Available For Download:
Performance : Sensitivity: 84%, Specificity: 88%
License: free