All the tools you need to analyse your miRNAs

DMD


miRNA Databases Other Tools


Analysis Scheme:
The Dietary microRNA Database is a searchable database of published and novel microRNA sequences discovered in human food. The annotation covers the hairpin structure of the pre-microRNAs, cross-species sequence comparison on each mature microRNA, reported disease relevance, and the experimentally validated gene targets, of which a gene regulation network was built for each entry. DMD can be also used to generate a list of features for use in machine learning applications. It is split up into two major categories: Primary, and Secondary. The Primary features are all sequence based features while the Secondary features are based on structural attributes.

Homepage: Link

Last Software Update: Feb. 15, 2015
Publication Date: June 1, 2015
Citations: 7 [via Pubmed]

Organism Specific:
  • human
  • chicken
  • fish
  • animals
  • plants

  • Reference Genome Needed:
    Online/Local: /
    Installation/User Level: easy
    User Adjustability:
    User support:
    Precomputed Target Results Available For Download:
    Input Data Required:
  • miRNA or pre-miRNA sequence

  • Cross-Refferences:
  • PubMed
  • miRBase

  • miRNA Databases
    Software Used For Target Prediction:
  • MirTarget
  • TargetScan
  • psRNAtarget

  • Data Collection:
  • miRNA basic information
  • target experimental
  • predicted target
  • diseases/pathways






  • Comments & Ratings